Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015903295.1_cds_XP_016453319.1_47435
CDS Infomation	[gene=LOC107777709] [db_xref=GeneID:107777709] [protein=putative late blight resistance protein homolog R1A-3 isoform X3] [protein_id=XP_016453319.1] [location=join(81287..81346,81952..83068,83144..85701)] [gbkey=CDS]
Sequence	ATGGAAAGAGGAAAACAAAATGAAGGAGAAACAGAGAAAGGGGAAGCAAACAACTCATCG GTCTCATCTTATGTACTTCGCAAGGACATTTTCAATCTTCTGGATTTCATAGAGAGGTTA AAGAATGGACGAGATCAAATTGCTCTTGACATGGATCAAATTGAAAAGCTGAAGCTGGAA CTGACATTTATGTCGACATTTCTTCAGCTTTCTTGTTCCAATTTGGATGGTTTTAATGCG GAAATGTCTCGCAAAGCACAACAGGTCGATGATCTGGTTCGGTCAGTTTTCTATCAAAGT GGAGATAACATGCTGGTTAAATATGACATGGATCATGTCATTTCTCACGTCCTGGAAAAT ATCAAAAGTTGTATCAGCTCACCACATTATTCTAAATCAAGTGCCACCATGACTGAGGAG CAGTTGGTTGAACTTTTGGATTCGCTCCTCGTGAATCTCTGTGATCTTCCCAAGCACTGT GTTGAGTTGAAGACTCAATACGAGATAATTCAAAATGTGTGCGACAATATAAGAGATTTC CTTGGGTTAAAAGTAAATGGTTGCATTGAGCATGAGACAATTGAATATGTCTTACCTCAA TTTCAACTTATGGCTGAGAGAGTAGGACACTTCTGTTTTGTCCTTTTGACTGATCAACTT GGTGTCTCTCAACTCAGTTTCAAGCTAGTTGATCTACTTGTGAAGATTATTCCTGTTGAA CTGGAAGTCATGTACATATGTTCTACAAATTTGACAACTTCAAAGTCAACAGAAGTTGGA CGCTTCTTTAAGAAGCTCCTAGGAGCCTCTCCATACATTCTTAGAGAATATTTGTTTAAT CTACAAGCGCACATGGTGGCTGTTCTTACTGCTAGCACTTCAGCTCGAAACATTCATGTC ATGATAGAGTTCCTATTGATTATTCTCACAGATGTGCCCAAGGACTTTATTCATCATGAA AAATTGTTCGATCTCTTGACACGAGTTGGAGCACTTACCAGGGAGGTATCCATTCTTGTT TGCAACTTAGAAGAGAAATCAAGGGGTGAAGTGAATACCAGTGAAACAAACTGTGGCAGT GTAGACTTGCTGGAGAGTATTGAACTACTGAAGGAAGATCTCAAGCATGTTTTCCTGAAA GCCCCCGAAGACTCATCTCAACTAAGCTTCCCCATGAACTCATCTCAACTCAGCTTCCCC ATGAGTGACGGACCACTCTTCATGACTCTTCTACTCAAAAACTTAAATGACTTGCTCAAT TCCAATGCGTATTCAGTTGTTTTAATAAAGCAAGAAATTGGACTGGTGAAAGAAGACCTA GAATTCATAAGACCGTTCTTCACGAATGTTGAGCAAGAATTGAACAGAGATCTCTGGACT CATGTTCTAGATGTGGCATATGAGGCAGAACATGCCATTAATTCAATTATGGTCAGAGAT CACGGTCTCTTGCAACTTATCTTCTCACTTCCGGGTAACGTAGAAAAGATCAAGCTTATC AAAGAAGAGGTATCAAAGACGATCCAAAAGAACCAGGGTCTTGTTGTCGTAACATCTCCC AACAAGCTAGTTCAGAGTGGGTTTGAGGAGGAGACAAACTGGATAATAAGGAAGCTCACT AGTGGTCCAGCAACGTTAGATGTCATTTCGATCATTGGCATGCCAGGGCTTGGAAAAACT ACTTTGGCTTACAGAGTATATAATGATAAGTCTATTGCTAATCATTTCGATGTTCGTGCA TGGTGCACAATCGACCAAGAGTATGACATGAATAAGATTTTGCAGAAAATTTATAATCAA GTCATTGGTTCAGATGCGAAATTCAGTGAGGATTTTGTTGTTGGTGATAAGCTCCAAAGA GAGCTATGTAGAAGGAGGTTCCTAATTGTCTTGGATGACTTGTGGGATACTGCCGCATGG GATGATTTAACAAGACATTTTCCTGAATTTATGAAAGGAAGCAGAGTCATTTTAACAAGT CGAATAATGGAAGTGGCTTTGTATGGAAAACGCTACACTGATCCTCTTCATCTTCGATTG CTAAGTCTAGAAGAAAGTTGGGAATTATTAGAGAGAAAGGTATTCGGAAAAGAAAGTTGC CCTGTTGAACTATTGGATGTTGGATATAAAATAACCAAAAAATGTAAAGGGCTTCCGTTG GTACTTCATCTGATTGGTGGAGTCATTACAACAAAGGAAAAGAATAAGGCTTTTTGGTGT GAAGTTCTAAACAATTTGAATTCCAATTTATTAGATGATTTTGAATTCATGAAGGTTATA CAATTTAGTTATGACCATTTATCAGATCACTTGAAGCCGTGCCTACTTTACCTTGCAAGC TATCCAAAGGATGAATATATTGAAATCTCTGAATTGAAAGATTTATGGAGTGCTGAAGGA CTTGTGGAACAGACTGAGATGAAAAGTGTGGAAGAAGTAGTGGAGGTTTATTTGGATGAG TTAATTTCCAGTAGCTTGGTAATAGTTTCCGATGAGAGAGGTAGGGCATCGAGTTACCGA ATTCATGATCTTGTGCATGATTTTTGTTTGGAAAAAGCTAGAAAGGAAAAGTTGTTTGAT TTCATAAGTTCAAGTGCTCCGTCTTCTTCTTCTTCAGATCGGGTGCCACGTGCAATGATC ATTCGTTATGACCGACGTCTTTTTCATTTGGATGAAAATTTTGTCCTGTTCAATCCAGAA AAGAAAAATTCCTATGTTAAACGCCTCCTCTCTTTAAAGGTTTCTGATGGGAAGCACAAT CATCTTTCCTACAACTGTCACCTAAGACACTTGAGACTTCTTAAAAGGTTGGAGCTGCAC AAAATAAGATTGACGTATTCTTTGCTGAATGAAATAGGCATGCTTGTTCATTTGAGGTGC TTAAGGATTCAGATGAAGGCAAAAACACTTCCTCCGTCATTTTCAAATCTCTTGAATCTG GAAACTCTGGTGGTGGATAACCAGGGATCAAACATGGTACTATCACCTAGTATTTGGAGT CTTGTAAAGTTACAACATGTGAGCATGGATAGTTGTTCGGTCTTTGATTTGGATACTGAT GAACCAACAATGTTAGAAGAGGACTTAATGTTAGAAAATTTGAGAATATTGTATGGTCTC AAGCTTTCCTCTTCAGGAAACACACAGGATATTTTCAAAAGGTTTCCCAATCTTCGAAGC CTTACATTCACCATTGAGGAACCCTGGCCTTGTTCAGCAGAGCAGATTTGTTTTCCAAGA TTGGATATCCTTGATGAACTTGAAGAAGTTCGCGCATATTTTTACCCATGTATACATCAG TGTGATTTTCACTTCCCTTCGAGCTTGAAAAAACTTGTATTGGGGAGCTTTGCTCTGCCA TCCAATTCACTGTCAAGAATTGCGAGACTGCCCAACCTTCAAAACCTGAGTCTAGAAGAA GCAATCATCCAGGGGAAAGAATGGAACATGGAAGAAGAAGACACCTTCGAGAATCTCAAA TCGCTGACACTGGATAGGGTGTCTTTATCTGAATGGAAGGTTAATGGAGAGGAATCCTTT CCCGTGCTTGAGGAATTACAAATACTAGACTGTACTGAGCTTGTGGAGATCCCGGACAGT TTTGGTGATATTTTTTCATTAAATTGCATCTCACTGTTGGGCAGCCGTCAACTTGAAGTT TCAGCCATAACGATTAAGGAATATGTTGCAGATATGATGGGAGAAGACAAGCTTGAGGTA AAGTGCTACTCGTGA

Peptide Sequence

PEP ID	XP_016453319.1
PEP Infomation	PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X3 [Nicotiana tabacum]
Sequence	MERGKQNEGETEKGEANNSSVSSYVLRKDIFNLLDFIERLKNGRDQIALDMDQIEKLKLE LTFMSTFLQLSCSNLDGFNAEMSRKAQQVDDLVRSVFYQSGDNMLVKYDMDHVISHVLEN IKSCISSPHYSKSSATMTEEQLVELLDSLLVNLCDLPKHCVELKTQYEIIQNVCDNIRDF LGLKVNGCIEHETIEYVLPQFQLMAERVGHFCFVLLTDQLGVSQLSFKLVDLLVKIIPVE LEVMYICSTNLTTSKSTEVGRFFKKLLGASPYILREYLFNLQAHMVAVLTASTSARNIHV MIEFLLIILTDVPKDFIHHEKLFDLLTRVGALTREVSILVCNLEEKSRGEVNTSETNCGS VDLLESIELLKEDLKHVFLKAPEDSSQLSFPMNSSQLSFPMSDGPLFMTLLLKNLNDLLN SNAYSVVLIKQEIGLVKEDLEFIRPFFTNVEQELNRDLWTHVLDVAYEAEHAINSIMVRD HGLLQLIFSLPGNVEKIKLIKEEVSKTIQKNQGLVVVTSPNKLVQSGFEEETNWIIRKLT SGPATLDVISIIGMPGLGKTTLAYRVYNDKSIANHFDVRAWCTIDQEYDMNKILQKIYNQ VIGSDAKFSEDFVVGDKLQRELCRRRFLIVLDDLWDTAAWDDLTRHFPEFMKGSRVILTS RIMEVALYGKRYTDPLHLRLLSLEESWELLERKVFGKESCPVELLDVGYKITKKCKGLPL VLHLIGGVITTKEKNKAFWCEVLNNLNSNLLDDFEFMKVIQFSYDHLSDHLKPCLLYLAS YPKDEYIEISELKDLWSAEGLVEQTEMKSVEEVVEVYLDELISSSLVIVSDERGRASSYR IHDLVHDFCLEKARKEKLFDFISSSAPSSSSSDRVPRAMIIRYDRRLFHLDENFVLFNPE KKNSYVKRLLSLKVSDGKHNHLSYNCHLRHLRLLKRLELHKIRLTYSLLNEIGMLVHLRC LRIQMKAKTLPPSFSNLLNLETLVVDNQGSNMVLSPSIWSLVKLQHVSMDSCSVFDLDTD EPTMLEEDLMLENLRILYGLKLSSSGNTQDIFKRFPNLRSLTFTIEEPWPCSAEQICFPR LDILDELEEVRAYFYPCIHQCDFHFPSSLKKLVLGSFALPSNSLSRIARLPNLQNLSLEE AIIQGKEWNMEEEDTFENLKSLTLDRVSLSEWKVNGEESFPVLEELQILDCTELVEIPDS FGDIFSLNCISLLGSRQLEVSAITIKEYVADMMGEDKLEVKCYS

Transcript Sequence

Gene sequence data has not been registered.